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Genomic epidemiology of invasive meningococcal disease in Scotland before, during, and after the COVID-19 pandemic: a retrospective observational study

The Lancet Infectious Diseases·July 21Open Access
Infectious DiseasesConfirms priorInvasive Meningococcal DiseaseRetrospective Observational StudyGenomic EpidemiologyMeningococcal VaccineMixedMeningococcal Group B Vaccine (FHbp)

Summary

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What was studied

This retrospective observational study examined the genomic and demographic characteristics of invasive meningococcal disease (IMD) in Scotland across three periods: pre-COVID-19 (July 2009–March 2020), COVID-19 (March 2020–March 2022), and post-COVID-19 (March 2022–April 2026), using interrupted time-series analyses on 1,143 reported cases.

Key findings

Of 27 pre-specified variables analysed, 6 changed between pre-COVID-19 and COVID-19 periods: genogroup B and MenB-FHbp-preventable status increased, while genogroups W and C, clonal complex 11, and polysaccharide-preventable status all decreased. By 2025–26, genogroup and lineage distributions had returned toward pre-COVID-19 patterns from a new baseline. No demographic changes (age, sex, deprivation) were associated with the pandemic.

Study limitations

Only culture-confirmed cases (512/1,143; 44.8%) had genomic data, potentially missing genomic shifts in culture-negative cases. The study is observational, limiting causal inference. Scotland-only data may limit generalisability to other settings.

Clinical implications

High-risk groups—infants under 1, children aged 1–4, adolescents/young adults aged 15–24, and adults 65+—remained consistently affected regardless of pandemic-era shifts, reinforcing the need for sustained, targeted vaccination. Integrated real-time genomic surveillance is essential to track capsular group fluctuations and guide timely vaccine policy updates.

Caveats

  • Findings are specific to Scotland and may not generalise to countries with different vaccination schedules or meningococcal epidemiology.
  • Only 44.8% (512/1,143) of IMD cases were culture-confirmed with a corresponding genome — genomic findings may not reflect the full case population.
  • The interrupted time-series design allows association but not causal conclusions about pandemic-related changes.
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  • The study was published July 21, 2026 and includes data up to April 20, 2026, making this among the most current available evidence.

Related Questions

Explore related topics

How did the COVID-19 pandemic affect meningococcal serogroup distribution in other countries?What are the current vaccine recommendations for high-risk groups for invasive meningococcal disease?How is whole genome sequencing used in real-time surveillance of meningococcal outbreaks?

Publication Details

Year
2026
Journal
The Lancet Infectious Diseases
Sample Size
n=1,143
Source
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